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  5. Dcu_g10341

Dcu_g10341


Description : RING-H2-class CTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g10341

Target Alias Description ECC score Gene Family Method Actions
AT5G24870 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g16604 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.04 OrthoFinder output from all 47 species
Aop_g26944 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Gb_30059 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os08g14320.1 LOC_Os08g14320 E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc03g118840.3.1 Solyc03g118840 Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e013125_P002 Zm00001e013125 Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 159 201
No external refs found!