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  5. Dcu_g10202

Dcu_g10202 (PTAC14)


Aliases : PTAC14

Description : cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14) & original description: none


Gene families : OG0004603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004603_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g10202
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AT4G20130 PTAC14 plastid transcriptionally active 14 0.02 OrthoFinder output from all 47 species
Mp7g10810.1 PTAC14 PAP7/TAC14 cofactor of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Zm00001e026650_P001 PTAC14, Zm00001e026650 PAP7/TAC14 cofactor of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0051180 vitamin transport IEP HCCA
MF GO:0090482 vitamin transmembrane transporter activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 177 400
IPR015353 Rubisco_LSMT_subst-bd 481 543
No external refs found!