Aliases : GRMZM2G143392
Description : 27.3.85 RNA.regulation of transcription.sigma like plant Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light. RNApolymerase sigma subunit 2 (SIG2)
Gene families : OG_01_0001192 (Gene family) Phylogenetic Tree(s): OG0001192_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): Zm00001d049160 | |
Cluster | HCCA cluster: Cluster_163 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G08540 | ATSIG1, SIGB,... | RNApolymerase sigma subunit 2 | 0.16 | Gene family | |
AT2G36990 | SIGF, SIG6,... | RNApolymerase sigma-subunit F | 0.17 | Gene family | |
AT5G13730 | SIGD, SIG4 | sigma factor 4 | 0.03 | Gene family | |
GSVIVT01019326001 | No alias | 27.3.85 RNA.regulation of transcription.sigma like plant... | 0.13 | Gene family | |
GSVIVT01025717001 | No alias | No description available | 0.09 | Gene family | |
GSVIVT01032193001 | No alias | 27.3.85 RNA.regulation of transcription.sigma like plant... | 0.03 | Gene family | |
GSVIVT01035330001 | No alias | 27.3.85 RNA.regulation of transcription.sigma like plant... | 0.03 | Gene family | |
LOC_Os03g16430 | Os03g0271100 | 27.3.85 RNA.regulation of transcription.sigma like plant... | 0.03 | Gene family | |
LOC_Os08g14450 | Os08g0242800,... | No description available | 0.02 | Gene family | |
LOC_Os11g26160 | Os11g0448400 | 27.3.85 RNA.regulation of transcription.sigma like plant... | 0.15 | Gene family | |
MA_10429585g0010 | No alias | 27.3.85 RNA.regulation of transcription.sigma like plant... | 0.06 | Gene family | |
Smo117159 | PACid_15403291 | 27.3.85 RNA.regulation of transcription.sigma like plant... | 0.06 | Gene family | |
Solyc01g081490.3.1 | Solyc01g081490.3 | 27.3.85 RNA.regulation of transcription.sigma like plant... | 0.17 | Gene family | |
Solyc01g087690.2.1 | Solyc01g087690.2 | 27.3.85 RNA.regulation of transcription.sigma like plant... | 0.04 | Gene family | |
Solyc08g065970.3.1 | Solyc08g065970.3 | 27.3.85 RNA.regulation of transcription.sigma like plant... | 0.03 | Gene family | |
Solyc09g008040.3.1 | Solyc09g008040.3 | No description available | 0.09 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan |
BP | GO:0006352 | DNA-templated transcription, initiation | IEA | InterProScan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |