Dcu_g09922


Description : not classified & original description: none


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g09922

Target Alias Description ECC score Gene Family Method Actions
AT2G01360 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT2G01390 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g015741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.03 OrthoFinder output from all 47 species
Gb_32462 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.05 OrthoFinder output from all 47 species
Gb_36347 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.04 OrthoFinder output from all 47 species
LOC_Os01g07340.1 LOC_Os01g07340 Pentatricopeptide repeat-containing protein At5g66631... 0.03 OrthoFinder output from all 47 species
Len_g59567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_89328g0010 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.03 OrthoFinder output from all 47 species
Msp_g25744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17969 CRM3, HCF152 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016802_P001 Zm00001e016802 Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 553 598
IPR002885 Pentatricopeptide_repeat 627 651
IPR002885 Pentatricopeptide_repeat 654 696
IPR033443 PPR_long 199 375
No external refs found!