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  5. Dcu_g09850

Dcu_g09850


Description : translation initiation factor *(IF-2) & original description: none


Gene families : OG0001742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001742_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g09850
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT1G17220 FUG1 Translation initiation factor 2, small GTP-binding protein 0.03 OrthoFinder output from all 47 species
Ala_g09740 FUG1 translation initiation factor *(IF-2) & original... 0.02 OrthoFinder output from all 47 species
Als_g14191 FUG1 translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species
Aob_g07966 FUG1 translation initiation factor *(IF-2) & original... 0.02 OrthoFinder output from all 47 species
Cba_g22967 No alias translation initiation factor *(IF-2) & original... 0.06 OrthoFinder output from all 47 species
Ceric.08G043600.1 Ceric.08G043600 translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species
Cre07.g341850 FUG1 Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Ehy_g13904 No alias translation initiation factor *(IF-2) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os05g49970.1 FUG1, LOC_Os05g49970 IF-2 translation initiation factor 0.02 OrthoFinder output from all 47 species
Lfl_g02404 FUG1 translation initiation factor *(IF-2) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006962 No alias translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species
Smo98506 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Solyc07g056020.3.1 FUG1, Solyc07g056020 IF-2 translation initiation factor 0.02 OrthoFinder output from all 47 species
Solyc08g081900.4.1 Solyc08g081900 IF-2 translation initiation factor 0.03 OrthoFinder output from all 47 species
Spa_g57144 FUG1 translation initiation factor *(IF-2) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 201 358
IPR023115 TIF_IF2_dom3 488 591
No external refs found!