Dcu_g09606 (emb1629, APO2)

Aliases : emb1629, APO2

Description : organelle RNA splicing factor *(APO) & original description: none

Gene families : OG0001840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001840_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g09606

Target	Alias	Description	ECC score	Gene Family Method
Als_g04268	APO1	organelle RNA splicing factor *(APO) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g08716	emb1629, APO2	organelle RNA splicing factor *(APO) & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g25543	APO1	organelle RNA splicing factor *(APO) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01007874001	APO3	APO protein 3, mitochondrial OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01018392001	APO1	APO protein 1, chloroplastic OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01023615001	emb1629, APO2	APO protein 2, chloroplastic OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Ppi_g03107	emb1629, APO2	organelle RNA splicing factor *(APO) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g17814	No alias	organelle RNA splicing factor *(APO) & original description: none	0.05	OrthoFinder output from all 47 species
Solyc09g009400.4.1	APO3, Solyc09g009400	APO protein 3, mitochondrial OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e006942_P002	APO1, Zm00001e006942	APO protein 1, chloroplastic OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Zm00001e023481_P001	emb1629, APO2,...	APO protein 2, chloroplastic OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR023342	APO_dom	302	416
IPR023342	APO_dom	72	255

External Links

No external refs found!