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  5. Dcu_g09501

Dcu_g09501


Description : component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling complex & original description: none


Gene families : OG0003499 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003499_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g09501
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00049400 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Adi_g015419 No alias component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling... 0.02 OrthoFinder output from all 47 species
Als_g08585 No alias component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling... 0.04 OrthoFinder output from all 47 species
Aob_g05287 No alias component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling... 0.05 OrthoFinder output from all 47 species
Ceric.17G061000.1 Ceric.17G061000 component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling... 0.04 OrthoFinder output from all 47 species
Dde_g02926 No alias component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling... 0.04 OrthoFinder output from all 47 species
GSVIVT01026774001 No alias Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
GSVIVT01032326001 No alias Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Gb_36377 No alias component eIF2B-epsilon of eIF2B eIF2-GDP recycling complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g56740.1 LOC_Os02g56740 component eIF2B-epsilon of eIF2B eIF2-GDP recycling complex 0.02 OrthoFinder output from all 47 species
MA_10427623g0010 No alias component eIF2B-epsilon of eIF2B eIF2-GDP recycling complex 0.03 OrthoFinder output from all 47 species
Mp6g16030.1 No alias component eIF2B-epsilon of eIF2B eIF2-GDP recycling complex 0.05 OrthoFinder output from all 47 species
Msp_g06146 No alias component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling... 0.03 OrthoFinder output from all 47 species
Nbi_g01312 No alias component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002192 No alias component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling... 0.02 OrthoFinder output from all 47 species
Sam_g08095 No alias component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling... 0.02 OrthoFinder output from all 47 species
Smo166978 No alias Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Solyc01g098180.3.1 Solyc01g098180 component eIF2B-epsilon of eIF2B eIF2-GDP recycling complex 0.03 OrthoFinder output from all 47 species
Tin_g23370 No alias component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling... 0.04 OrthoFinder output from all 47 species
Zm00001e016193_P001 Zm00001e016193 component eIF2B-epsilon of eIF2B eIF2-GDP recycling complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0061666 UFM1 ligase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005835 NTP_transferase_dom 23 162
IPR003307 W2_domain 664 743
No external refs found!