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  5. Dcu_g09478

Dcu_g09478


Description : not classified & original description: none


Gene families : OG0003888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g09478
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00038410 evm_27.TU.AmTr_v1... Uncharacterized protein At3g49140 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g40386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33423 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024190_P001 Zm00001e024190 Uncharacterized protein At3g49140 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!