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  5. Dcu_g09007

Dcu_g09007


Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0004504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004504_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g09007

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00017150 evm_27.TU.AmTr_v1... No description available 0.11 OrthoFinder output from all 47 species
AMTR_s01224p00002240 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G46560 No alias transducin family protein / WD-40 repeat family protein 0.06 OrthoFinder output from all 47 species
Adi_g010442 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aev_g19704 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Aop_g69643 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.37G060800.1 Ceric.37G060800 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g05116 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01027171001 No alias No description available 0.02 OrthoFinder output from all 47 species
Len_g24856 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
Mp1g21310.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g25735 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ore_g29898 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.08 OrthoFinder output from all 47 species
Ppi_g30744 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2320.g028304 No alias not classified & original description: CDS=1-1296 0.03 OrthoFinder output from all 47 species
Sam_g52672 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Solyc01g096110.3.1 Solyc01g096110 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 2469 2500
IPR022033 Rav1p_C 866 1417
No external refs found!