Dcu_g09001

Description : pre-mRNA splicing factor *(SF1) & original description: none

Gene families : OG0000568 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000568_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g09001

Target	Alias	Description	ECC score	Gene Family Method
Als_g52019	No alias	pre-mRNA splicing factor *(SF1) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g52145	No alias	pre-mRNA splicing factor *(SF1) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene60850.t2	Aspi01Gene60850	pre-mRNA splicing factor *(SF1) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g10453	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g13278	No alias	pre-mRNA splicing factor *(SF1) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g29785	No alias	pre-mRNA splicing factor *(SF1) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10426554g0020	No alias	pre-mRNA splicing factor (SF1)	0.02	OrthoFinder output from all 47 species
Msp_g19076	No alias	pre-mRNA splicing factor *(SF1) & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g26612	No alias	pre-mRNA splicing factor *(SF1) & original description: none	0.04	OrthoFinder output from all 47 species
Solyc01g006010.3.1	Solyc01g006010	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004088	KH_dom_type_1	364	435
IPR032570	SF1-HH	231	345
IPR000504	RRM_dom	644	711

External Links

No external refs found!