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Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g08824 | |
| Cluster | HCCA: Cluster_163 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00032p00176600 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19233 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g26323 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g30775 | CRR2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g55158 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g24198 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.26G013000.1 | Ceric.26G013000 | not classified & original description: pacid=50600010... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g06799 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g07713 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08084 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g12590 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16673 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g17233 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g37654 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g38468 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g40949 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g40955 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g50973 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g36375 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g46230.1 | MEF1, LOC_Os01g46230 | RNA editing factor (MEF1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g41530.1 | LOC_Os03g41530 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g20420.1 | LOC_Os07g20420 | Pentatricopeptide repeat-containing protein At3g26782,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g37330.2 | LOI1, MEF11,... | RNA editing factor (MEF11) | 0.03 | OrthoFinder output from all 47 species | |
| MA_615077g0010 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| MA_71104g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g01185 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g28352 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g05844 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g16742 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g32044 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g12697 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19928 | CRR2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g20793 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g43621 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g64875 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g06149 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g08791 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g15635 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g17508 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g33764 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g44848 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g48495 | No alias | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Ppi_g49230 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g62508 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g102690.4.1 | Solyc01g102690 | Pentatricopeptide repeat-containing protein At3g49710... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g006990.1.1 | Solyc03g006990 | Pentatricopeptide repeat-containing protein At5g66520... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g066080.1.1 | OTP85, Solyc06g066080 | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05566 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g13752 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 320 | 344 |
| IPR002885 | Pentatricopeptide_repeat | 118 | 142 |
| IPR002885 | Pentatricopeptide_repeat | 421 | 444 |
| IPR002885 | Pentatricopeptide_repeat | 219 | 242 |
| IPR002885 | Pentatricopeptide_repeat | 522 | 546 |
| IPR002885 | Pentatricopeptide_repeat | 245 | 293 |
| IPR002885 | Pentatricopeptide_repeat | 447 | 494 |
| IPR002885 | Pentatricopeptide_repeat | 22 | 69 |
| IPR002885 | Pentatricopeptide_repeat | 144 | 192 |
| IPR002885 | Pentatricopeptide_repeat | 346 | 393 |
| IPR046848 | E_motif | 564 | 617 |
| No external refs found! |