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  5. Aev_g25563

Aev_g25563 (ATSS4, SS4, SSIV)


Aliases : ATSS4, SS4, SSIV

Description : not classified & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g25563
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00214840 ATSS4, SS4,... Probable starch synthase 4, chloroplastic/amyloplastic... 0.04 OrthoFinder output from all 47 species
AMTR_s00037p00164200 ATSS3, SS3,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
AT1G11720 ATSS3, SS3 starch synthase 3 0.02 OrthoFinder output from all 47 species
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.03 OrthoFinder output from all 47 species
AT5G65685 No alias UDP-Glycosyltransferase superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g05131 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g02255 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g05284 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000667 ATSS4, SS4, SSIV not classified & original description: CDS=177-2066 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007652 ATSS3, SS3 starch synthase *(SS3) & original description: CDS=201-2645 0.05 OrthoFinder output from all 47 species
Azfi_s0011.g012741 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: CDS=57-2150 0.04 OrthoFinder output from all 47 species
Cba_g26958 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33306 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G125000.1 ATSS4, SS4,... starch synthase *(SS4) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.18G020900.1 ATSS3, SS3,... starch synthase *(SS3) & original description:... 0.04 OrthoFinder output from all 47 species
Cre06.g282000 ATSS3, SS3 Carbohydrate metabolism.starch... 0.01 OrthoFinder output from all 47 species
Dac_g10971 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g45424 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08981 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19480 ATSS4, SS4, SSIV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43255 ATSS4, SS4, SSIV not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50824 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g20658 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012723001 ATSS3, SS3 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
LOC_Os04g53310.1 ATSS3, SS3,... starch synthase (SSIII) 0.02 OrthoFinder output from all 47 species
Len_g30585 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43983 ATSS3, SS3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04240 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g14910.1 ATSS4, SS4, SSIV starch synthase (SSIV) 0.06 OrthoFinder output from all 47 species
Mp1g23570.1 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.01 OrthoFinder output from all 47 species
Mp2g08030.1 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.05 OrthoFinder output from all 47 species
Mp2g20000.1 ATSS3, SS3 starch synthase (SSIII) 0.02 OrthoFinder output from all 47 species
Msp_g26184 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g34784 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02313 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15347 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07616 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39876 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g43473 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005824 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: CDS=149-3475 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0224.g026292 ATSS4, SS4, SSIV not classified & original description: CDS=1-2052 0.03 OrthoFinder output from all 47 species
Sam_g12030 No alias starch synthase *(SS5) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12378 No alias starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Smo154776 ATSS3, SS3 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Spa_g10367 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17570 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26732 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19651 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26044 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027473_P001 ATSS4, SS4,... starch synthase (SSIV) 0.03 OrthoFinder output from all 47 species
Zm00001e039962_P001 ATSS3, SS3,... starch synthase (SSIII) 0.02 OrthoFinder output from all 47 species
Zm00001e041682_P002 ATSS3, SS3,... starch synthase (SSIII) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 165 392
IPR001296 Glyco_trans_1 470 623
No external refs found!