Dcu_g08493


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08493
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00045930 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
AMTR_s00103p00113040 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g65570... 0.02 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004512 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005491 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g007789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g008596 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g017810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g020024 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g035661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g036756 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g067178 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g067896 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g067912 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g069154 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g111267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116582 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g18046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23888 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24367 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g03214 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03803 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g03840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04940 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g05057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05103 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g05105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05247 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06338 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06739 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g06803 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12718 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g14743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15655 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g17863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18668 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18909 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18957 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19004 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19013 OTP86 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Als_g19262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g24106 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26513 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g28024 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g28029 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g29166 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g29503 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30417 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30496 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Als_g30625 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30697 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30790 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30800 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30850 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g31230 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g31336 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g31748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33170 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33735 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g54506 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g54966 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55143 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g55854 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g57869 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58686 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g63542 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g37336 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07982 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16705 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21473 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g29357 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33556 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70213 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene43499.t1 REME1, Aspi01Gene43499 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66052.t1 Aspi01Gene66052 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0002.g001245 OTP82 not classified & original description: CDS=1-1971 0.05 OrthoFinder output from all 47 species
Azfi_s0002.g001624 No alias not classified & original description: CDS=110-1882 0.07 OrthoFinder output from all 47 species
Azfi_s0049.g030697 No alias not classified & original description: CDS=1-2361 0.08 OrthoFinder output from all 47 species
Azfi_s0303.g063784 No alias not classified & original description: CDS=1-1617 0.05 OrthoFinder output from all 47 species
Azfi_s1721.g106134 CRR22 not classified & original description: CDS=1-1431 0.07 OrthoFinder output from all 47 species
Cba_g04046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04734 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g06022 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07105 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g07323 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11319 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g20548 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g20648 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20741 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g21419 EMB2744 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g26306 No alias ssDNA-binding protein *(OSB) & original description: none 0.13 OrthoFinder output from all 47 species
Cba_g27691 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29852 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29871 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29910 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g35091 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g37951 EMB2758 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g44878 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Cba_g60651 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g63697 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67712 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g26939 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05677 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06775 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07698 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08459 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08531 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08536 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08718 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10321 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g11166 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g17095 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17266 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g18210 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g18549 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g21472 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g22981 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g23686 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26473 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g26758 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g33116 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36357 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g36987 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g37178 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38644 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39176 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39483 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40796 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Dcu_g40897 CRR22 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g43291 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43978 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g44864 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g45813 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Dcu_g46630 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g46754 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g47891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47892 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50014 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g02726 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g15835 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g16109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.02 OrthoFinder output from all 47 species
LOC_Os11g01836.1 LOC_Os11g01836 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g04269 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04760 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08125 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g28084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06676 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g06764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03167 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24030 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03998 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g07306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15027 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16678 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27419 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35704 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40875 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41304 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05289 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06477 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14886 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16492 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g21972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo34426 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.04 OrthoFinder output from all 47 species
Spa_g02637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06005 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45656 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g53273 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05116 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g20109 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g23278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29210 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g29866 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 148 171
IPR002885 Pentatricopeptide_repeat 174 220
IPR002885 Pentatricopeptide_repeat 72 120
No external refs found!