Zm00001d048948 (GRMZM2G419675, GRMZM2G454556)


Aliases : GRMZM2G419675, GRMZM2G454556

Description : 20.1 stress.biotic Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection. pathogenesis-related 4 (PR4)


Gene families : OG_01_0001851 (Gene family) Phylogenetic Tree(s): OG0001851_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d048948
Cluster HCCA cluster: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AT3G04720 HEL, PR4, PR-4 pathogenesis-related 4 0.04 Gene family
LOC_Os11g37960 Os11g0592100 20.1 stress.biotic Encodes a protein similar to the... 0.02 Gene family
LOC_Os11g37970 Os11g0592200 20.1 stress.biotic Encodes a protein similar to the... 0.03 Gene family
MA_10428528g0010 No alias 20.1 stress.biotic Encodes a protein similar to the... 0.02 Gene family
MA_10434174g0010 No alias 20.1 stress.biotic Encodes a protein similar to the... 0.04 Gene family
Solyc01g097240.3.1 Solyc01g097240.3 20.1 stress.biotic Encodes a protein similar to the... 0.02 Gene family
Solyc01g097270.3.1 Solyc01g097270.3 20.1 stress.biotic Encodes a protein similar to the... 0.03 Gene family
Zm00001d048949 GRMZM2G117971 20.1 stress.biotic Encodes a protein similar to the... 0.02 Gene family
Zm00001d048950 GRMZM2G117942 20.1 stress.biotic Encodes a protein similar to the... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0042742 defense response to bacterium IEA InterProScan
BP GO:0050832 defense response to fungus IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001153 Barwin_dom 34 152
No external refs found!