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  5. Dcu_g08383

Dcu_g08383 (ATARFA1F, ARFA1F)


Aliases : ATARFA1F, ARFA1F

Description : not classified & original description: none


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08383

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00209290 ATARFA1B, ARFA1B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Adi_g024167 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g00831 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g21909 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20795 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31560 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G015600.1 ATARFA1B,... ARF-GTPase *(ARF1) & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g05473 ATARFA1F, ARFA1F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09805 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013765001 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
GSVIVT01017654001 ATARFA1F, ARFA1F Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Gb_00987 ATARFA1F, ARFA1F ARF-GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os01g16030.1 ATARFA1B,... ARF-GTPase 0.04 OrthoFinder output from all 47 species
Lfl_g23069 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33269 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32166 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g19970 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c10_20740V3.1 ARFA1E,... ADP-ribosylation factor A1E 0.02 OrthoFinder output from all 47 species
Pp3c10_25070V3.1 ATARFA1F,... ADP-ribosylation factor A1F 0.02 OrthoFinder output from all 47 species
Pp3c12_14910V3.1 ARFA1E,... ADP-ribosylation factor A1E 0.01 OrthoFinder output from all 47 species
Solyc04g025560.4.1 ARFA1E,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
Spa_g16801 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011790_P001 ATARFA1B,... ARF-GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e015538_P002 ATARFB1B,... ARF-GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e025541_P003 ATARFA1F,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e033127_P003 ARF1A1C, Zm00001e033127 ARF-GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 1 135
No external refs found!