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  5. Dcu_g08313

Dcu_g08313


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08313

Target Alias Description ECC score Gene Family Method Actions
Adi_g005523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056922 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g097754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37820 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g49640 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16961 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g17036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22292 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18668 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g24134 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39237 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g08304 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03671 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g19954 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23786 MEF19 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33058 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene25447.t1 Aspi01Gene25447 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07743 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19882 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20727 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g31308 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34536 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Dac_g12138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25154 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g31950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05787 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08317 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08595 CRR2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g08849 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08923 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09752 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11917 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36545 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38468 OTP86 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g38590 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g40968 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43120 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45167 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45910 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47921 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47933 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g18670 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010869001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
GSVIVT01028154001 No alias Pentatricopeptide repeat-containing protein At2g35030,... 0.04 OrthoFinder output from all 47 species
Lfl_g06251 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07412 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32911 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39239 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species
Msp_g16104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31791 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41395 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08329 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24196 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17481 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23526 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13573 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16520 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_4940V3.1 Pp3c17_4940 organellar single-stranded DNA binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g04645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05095 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g07585 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13340 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53727 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g56808 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g43933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo16626 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.04 OrthoFinder output from all 47 species
Spa_g10134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
Zm00001e020442_P001 Zm00001e020442 Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 1131 1193
IPR046849 Eplus_motif 1198 1221
IPR002885 Pentatricopeptide_repeat 408 455
IPR002885 Pentatricopeptide_repeat 813 859
IPR002885 Pentatricopeptide_repeat 106 153
IPR002885 Pentatricopeptide_repeat 711 759
IPR002885 Pentatricopeptide_repeat 913 960
IPR002885 Pentatricopeptide_repeat 1014 1061
IPR002885 Pentatricopeptide_repeat 514 557
IPR002885 Pentatricopeptide_repeat 308 354
IPR002885 Pentatricopeptide_repeat 383 405
IPR002885 Pentatricopeptide_repeat 613 643
IPR002885 Pentatricopeptide_repeat 987 1013
IPR002885 Pentatricopeptide_repeat 282 305
IPR002885 Pentatricopeptide_repeat 484 509
IPR002885 Pentatricopeptide_repeat 181 206
IPR002885 Pentatricopeptide_repeat 209 238
IPR002885 Pentatricopeptide_repeat 887 910
IPR032867 DYW_dom 1229 1321
No external refs found!