Dcu_g08039


Description : not classified & original description: none


Gene families : OG0001441 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001441_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08039
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT4G25170 No alias Uncharacterised conserved protein (UCP012943) 0.03 OrthoFinder output from all 47 species
AT5G54540 No alias Uncharacterised conserved protein (UCP012943) 0.04 OrthoFinder output from all 47 species
MA_10427237g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g08275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000362 No alias not classified & original description: CDS=283-1233 0.02 OrthoFinder output from all 47 species
Spa_g29876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!