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Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00241920 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G11290 | CRR22 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003314 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003786 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004274 | LPA66 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g014360 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g033814 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g080646 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g42281 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g48795 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g16843 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g25829 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04420 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04477 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06136 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06261 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06337 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06338 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06815 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07235 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07259 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07370 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07426 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g13524 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g15385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g17863 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18512 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18519 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18806 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19042 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19109 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19136 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19296 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g20449 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26423 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26644 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g29166 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g30308 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g30837 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32399 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54958 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g55271 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g59184 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g27579 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16217 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene22419.t1 | Aspi01Gene22419 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene48553.t1 | Aspi01Gene48553 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000446 | No alias | not classified & original description: CDS=1-2970 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000662 | No alias | not classified & original description: CDS=1-2844 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008405 | No alias | not classified & original description: CDS=233-2125 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008781 | No alias | not classified & original description: CDS=1-2346 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009381 | No alias | not classified & original description: CDS=1-2946 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0034.g025187 | OTP84 | not classified & original description: CDS=1-2199 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0039.g026466 | No alias | not classified & original description: CDS=1-2883 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0040.g026593 | CRR22 | not classified & original description: CDS=1-1842 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0050.g030992 | No alias | not classified & original description: CDS=1-2877 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036354 | CRR22 | not classified & original description: CDS=140-2386 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0069.g036568 | No alias | not classified & original description: CDS=1-2256 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0078.g038161 | EMB2758 | not classified & original description: CDS=138-2465 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0087.g042376 | No alias | not classified & original description: CDS=1-2979 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0094.g043395 | No alias | not classified & original description: CDS=1-2703 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0112.g045771 | No alias | not classified & original description: CDS=1-2433 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0113.g045914 | No alias | not classified & original description: CDS=1-2748 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0128.g048778 | No alias | not classified & original description: CDS=1-2676 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0164.g054282 | No alias | not classified & original description: CDS=1-4443 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0168.g054598 | No alias | not classified & original description: CDS=1-1869 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0173.g055844 | CRR22 | not classified & original description: CDS=1-1863 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0175.g055975 | No alias | not classified & original description: CDS=1-4965 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0194.g057201 | No alias | not classified & original description: CDS=1-3408 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0282.g063034 | No alias | not classified & original description: CDS=389-4795 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0283.g063072 | No alias | not classified & original description: CDS=1-2475 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0405.g068372 | No alias | not classified & original description: CDS=1-2844 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0444.g070606 | No alias | not classified & original description: CDS=1-2982 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0471.g072911 | No alias | not classified & original description: CDS=1-2451 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0658.g081282 | No alias | not classified & original description: CDS=13-2166 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s1107.g097662 | No alias | not classified & original description: CDS=1-2811 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06540 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07325 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07756 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19907 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19913 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g29979 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g76849 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g77187 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G014900.1 | Ceric.10G014900 | not classified & original description: pacid=50613343... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G086200.1 | OTP84, Ceric.11G086200 | not classified & original description: pacid=50595902... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G036800.1 | Ceric.12G036800 | not classified & original description: pacid=50601765... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G082600.1 | Ceric.13G082600 | not classified & original description: pacid=50636923... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G056400.1 | Ceric.15G056400 | not classified & original description: pacid=50639467... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.15G066400.1 | Ceric.15G066400 | not classified & original description: pacid=50640755... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G069700.1 | CRR2, Ceric.18G069700 | not classified & original description: pacid=50622363... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G040700.1 | Ceric.20G040700 | not classified & original description: pacid=50566494... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.26G035200.1 | Ceric.26G035200 | not classified & original description: pacid=50599772... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G033800.1 | Ceric.30G033800 | not classified & original description: pacid=50608836... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.30G037100.1 | Ceric.30G037100 | not classified & original description: pacid=50608918... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.37G034100.1 | Ceric.37G034100 | not classified & original description: pacid=50616957... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g42743 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g44353 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05681 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g06473 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07695 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g07728 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08084 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08937 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g17197 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g38639 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g50973 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g22172 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003957001 | No alias | Pentatricopeptide repeat-containing protein At5g65570... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01010869001 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017209001 | VAC1, ECB2, ATECB2 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01021756001 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g63260.3 | LOC_Os03g63260 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07116 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07805 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_137736g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_935792g0010 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.05 | OrthoFinder output from all 47 species | |
| MA_953793g0020 | DOT4 | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
| Mp5g04990.1 | PTAC9, OSB2 | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15926 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g05322 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g12551 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g12697 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17481 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20793 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g26158 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g43621 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03361 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g63789 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g03800 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14049 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16146 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16664 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g17245 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g38738 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g39170 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g39953 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g53279 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g32155 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g35668 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003605_P001 | DOT4, Zm00001e003605 | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011467_P004 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 213 | 261 |
| IPR002885 | Pentatricopeptide_repeat | 516 | 563 |
| IPR002885 | Pentatricopeptide_repeat | 313 | 362 |
| IPR002885 | Pentatricopeptide_repeat | 414 | 462 |
| IPR002885 | Pentatricopeptide_repeat | 617 | 664 |
| IPR002885 | Pentatricopeptide_repeat | 184 | 210 |
| IPR002885 | Pentatricopeptide_repeat | 591 | 613 |
| IPR002885 | Pentatricopeptide_repeat | 692 | 716 |
| IPR002885 | Pentatricopeptide_repeat | 490 | 513 |
| IPR046848 | E_motif | 734 | 786 |
| No external refs found! |