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Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g17260 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20987 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g07904 | CRR22 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g03415 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g07015 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g16000 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g16519 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g16533 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16755 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16842 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g20191 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g20531 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g28404 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g28710 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g28721 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g31313 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g38568 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g67581 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g67866 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g68105 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g68112 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g68120 | CRR22 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g68694 | OTP84 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g70953 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene06316.t1 | Aspi01Gene06316 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34548.t1 | Aspi01Gene34548 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0232.g059338 | No alias | not classified & original description: CDS=1-1296 | 0.09 | OrthoFinder output from all 47 species | |
| Azfi_s1721.g106131 | No alias | not classified & original description: CDS=1-2793 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g07225 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g25477 | EMB2758 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g44516 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g60651 | CRR22 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g77637 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.10G063700.1 | Ceric.10G063700 | not classified & original description: pacid=50612924... | 0.08 | OrthoFinder output from all 47 species | |
| Dac_g05152 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g06135 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009974001 | No alias | Pentatricopeptide repeat-containing protein At3g26540... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028747001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_32017 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g25822 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g05695 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g13846 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g30407 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g35656 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 306 | 331 |
| IPR002885 | Pentatricopeptide_repeat | 407 | 426 |
| IPR002885 | Pentatricopeptide_repeat | 334 | 364 |
| IPR002885 | Pentatricopeptide_repeat | 458 | 516 |
| IPR046848 | E_motif | 550 | 607 |
| IPR002885 | Pentatricopeptide_repeat | 231 | 278 |
| IPR002885 | Pentatricopeptide_repeat | 129 | 178 |
| No external refs found! |