Dcu_g07692 (LOS1)

Aliases : LOS1

Description : mRNA-translocation factor *(eEF2)) & original description: none

Gene families : OG0001393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001393_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g07692
Cluster	HCCA: Cluster_210

Target	Alias	Description	ECC score	Gene Family Method
AT1G56070	LOS1	Ribosomal protein S5/Elongation factor G/III/V family protein	0.04	OrthoFinder output from all 47 species
Cre12.g516200	LOS1	Protein biosynthesis.translation elongation.eEF2...	0.02	OrthoFinder output from all 47 species
LOC_Os02g32030.1	LOS1, LOC_Os02g32030	mRNA-translocation factor (eEF2)	0.03	OrthoFinder output from all 47 species
Mp2g20190.1	LOS1	mRNA-translocation factor (eEF2)	0.01	OrthoFinder output from all 47 species
Mp2g20200.1	LOS1	mRNA-translocation factor (eEF2)	0.01	OrthoFinder output from all 47 species
Pp3s128_10V3.1	LOS1, Pp3s128_10	Ribosomal protein S5/Elongation factor G/III/V family protein	0.02	OrthoFinder output from all 47 species
Solyc08g062910.4.1	LOS1, Solyc08g062910	mRNA-translocation factor (eEF2)	0.05	OrthoFinder output from all 47 species
Solyc08g062920.3.1	LOS1, Solyc08g062920	mRNA-translocation factor (eEF2)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000640	EFG_V-like	724	811
IPR000795	T_Tr_GTP-bd_dom	17	342
IPR041095	EFG_II	487	549
IPR005517	Transl_elong_EFG/EF2_IV	610	722
IPR004161	EFTu-like_2	394	467

External Links

No external refs found!