Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00022p00023600 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g50270... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00022p00075660 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00022p00252600 | MEF1 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g05438 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g25067 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g44555 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ala_g05283 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ala_g10403 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g36534 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Aob_g40241 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0124.g048518 | No alias | not classified & original description: CDS=103-1761 | 0.05 | OrthoFinder output from all 47 species | |
Cba_g11529 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.25G017200.1 | VAC1, ECB2,... | not classified & original description: pacid=50594284... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g05441 | RARE1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dac_g32186 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g08531 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g21324 | OTP84 | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Dcu_g28005 | CRR2 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g36065 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g36893 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g38628 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Dcu_g45929 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g46395 | EMB2758 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Dcu_g50023 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01000936001 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01002530001 | No alias | Pentatricopeptide repeat-containing protein At3g49710... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01004939001 | RARE1 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01007974001 | No alias | Pentatricopeptide repeat-containing protein At5g61400... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01011887001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01018098001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01018597001 | No alias | RNA processing.organelle machineries.RNA... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01018877001 | No alias | Pentatricopeptide repeat-containing protein At5g44230... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01023860001 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01029347001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01030080001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01030443001 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01033304001 | CRR28 | Pentatricopeptide repeat-containing protein At2g02980,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01037562001 | PDE247, CLB19 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g60430.1 | LOC_Os01g60430 | RNA editing factor (MEF10) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os07g47370.1 | LOC_Os07g47370 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.05 | OrthoFinder output from all 47 species | |
MA_39595g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
MA_482767g0010 | OTP84 | Pentatricopeptide repeat-containing protein At1g20230... | 0.05 | OrthoFinder output from all 47 species | |
MA_863836g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.08 | OrthoFinder output from all 47 species | |
Msp_g17026 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Msp_g24500 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Msp_g43791 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g46079 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g25945 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g63793 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g29087 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g46501 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo130453 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Smo81196 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
Solyc02g005280.1.1 | Solyc02g005280 | Pentatricopeptide repeat-containing protein At1g50270... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g014360.3.1 | LOI1, MEF11,... | RNA editing factor (MEF11) | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g065030.1.1 | EMB2758, Solyc02g065030 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g116000.1.1 | Solyc03g116000 | Pentatricopeptide repeat-containing protein At3g47530... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g069700.4.1 | Solyc06g069700 | Pentatricopeptide repeat-containing protein At5g61400... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g084580.1.1 | Solyc06g084580 | Pentatricopeptide repeat-containing protein At4g20770... | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g055310.1.1 | Solyc07g055310 | Pentatricopeptide repeat-containing protein At2g41080... | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g082170.4.1 | Solyc09g082170 | Pentatricopeptide repeat-containing protein At4g14820... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g007230.1.1 | Solyc11g007230 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.05 | OrthoFinder output from all 47 species | |
Solyc11g008940.1.1 | CRR2, Solyc11g008940 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g067210.1.1 | Solyc11g067210 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g042400.1.1 | SLO1, Solyc12g042400 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.06 | OrthoFinder output from all 47 species | |
Spa_g27799 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e015695_P001 | Zm00001e015695 | Pentatricopeptide repeat-containing protein At4g16835,... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 310 | 336 |
IPR002885 | Pentatricopeptide_repeat | 77 | 99 |
IPR002885 | Pentatricopeptide_repeat | 512 | 534 |
IPR002885 | Pentatricopeptide_repeat | 411 | 433 |
IPR002885 | Pentatricopeptide_repeat | 338 | 367 |
IPR002885 | Pentatricopeptide_repeat | 106 | 133 |
IPR046848 | E_motif | 553 | 606 |
IPR002885 | Pentatricopeptide_repeat | 134 | 181 |
IPR002885 | Pentatricopeptide_repeat | 436 | 484 |
IPR002885 | Pentatricopeptide_repeat | 235 | 281 |
No external refs found! |