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  5. Dcu_g07449

Dcu_g07449


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g07449

Target Alias Description ECC score Gene Family Method Actions
AT1G67950 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
Adi_g022185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115931 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g14819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11474 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g19115 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g21309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009796 No alias not classified & original description: CDS=86-811 0.04 OrthoFinder output from all 47 species
Ceric.05G062300.1 Ceric.05G062300 not classified & original description: pacid=50578128... 0.05 OrthoFinder output from all 47 species
Dac_g13809 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04385 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011624001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01020030001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01022464001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
LOC_Os03g53770.1 LOC_Os03g53770 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g50790.1 LOC_Os04g50790 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g54870.1 LOC_Os04g54870 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g55926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g08610.1 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g30567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00654 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g07450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07486 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g11660 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc10g076890.3.1 Solyc10g076890 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g38160 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e012039_P002 Zm00001e012039 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 68
No external refs found!