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  5. Dcu_g06427

Dcu_g06427


Description : not classified & original description: none


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06427
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Aev_g06759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10282 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g12238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g13606 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18254 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g20063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02696 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G036200.1 Ceric.03G036200 not classified & original description: pacid=50571952... 0.05 OrthoFinder output from all 47 species
Ceric.11G091600.1 Ceric.11G091600 not classified & original description: pacid=50596008... 0.05 OrthoFinder output from all 47 species
Ceric.19G017900.1 Ceric.19G017900 not classified & original description: pacid=50576444... 0.05 OrthoFinder output from all 47 species
Ceric.26G072600.1 EMB2750, Ceric.26G072600 not classified & original description: pacid=50599096... 0.03 OrthoFinder output from all 47 species
Ceric.39G058300.1 Ceric.39G058300 not classified & original description: pacid=50582561... 0.03 OrthoFinder output from all 47 species
Dac_g22799 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g01567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.03 OrthoFinder output from all 47 species
Gb_11322 No alias Pentatricopeptide repeat-containing protein At2g01390... 0.04 OrthoFinder output from all 47 species
Len_g08870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17138 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g24872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17969 CRM3, HCF152 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017180 CRM3, HCF152 not classified & original description: CDS=1-2193 0.04 OrthoFinder output from all 47 species
Sam_g12526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 224 273
IPR002885 Pentatricopeptide_repeat 155 203
IPR033443 PPR_long 475 635
No external refs found!