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  5. Dcu_g06413

Dcu_g06413


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06413

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00080380 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00176600 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT3G28640 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g004476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g076322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33642 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40270 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15480 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g38565 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene71026.t1 Aspi01Gene71026 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000446 No alias not classified & original description: CDS=1-2970 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012535 No alias not classified & original description: CDS=1-2328 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g016137 No alias not classified & original description: CDS=1-1566 0.06 OrthoFinder output from all 47 species
Cba_g04710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37893 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G091600.1 Ceric.07G091600 not classified & original description: pacid=50627346... 0.03 OrthoFinder output from all 47 species
Ceric.38G063600.1 Ceric.38G063600 not classified & original description: pacid=50580365... 0.05 OrthoFinder output from all 47 species
Ceric.39G011500.1 Ceric.39G011500 not classified & original description: pacid=50582697... 0.03 OrthoFinder output from all 47 species
Dac_g02827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08886 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16673 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17220 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38639 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50085 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12101 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029885001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g03881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04367 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18041 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54669 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23499 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
MA_71104g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Msp_g17599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11260 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30359 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012042 No alias not classified & original description: CDS=1-3273 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017029 No alias not classified & original description: CDS=1-2337 0.02 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g006990.1.1 Solyc03g006990 Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
Solyc06g066080.1.1 OTP85, Solyc06g066080 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
Spa_g27926 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 182 212
IPR002885 Pentatricopeptide_repeat 493 518
IPR002885 Pentatricopeptide_repeat 693 717
IPR002885 Pentatricopeptide_repeat 292 314
IPR002885 Pentatricopeptide_repeat 115 163
IPR002885 Pentatricopeptide_repeat 620 667
IPR002885 Pentatricopeptide_repeat 418 464
IPR002885 Pentatricopeptide_repeat 519 566
IPR002885 Pentatricopeptide_repeat 318 365
IPR002885 Pentatricopeptide_repeat 217 264
No external refs found!