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  5. Dcu_g06404

Dcu_g06404 (MIRO1, emb2473)


Aliases : MIRO1, emb2473

Description : regulatory GTPase (MIRO) of mitochondrion fission & original description: none


Gene families : OG0002515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06404
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00020850 MIRO1, emb2473,... Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G27540 MIRO1, emb2473 MIRO-related GTP-ase 1 0.05 OrthoFinder output from all 47 species
Aop_g06577 MIRO1, emb2473 regulatory GTPase (MIRO) of mitochondrion fission &... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010418 MIRO1, emb2473 regulatory GTPase (MIRO) of mitochondrion fission &... 0.02 OrthoFinder output from all 47 species
Ceric.32G015700.1 MIRO1, emb2473,... regulatory GTPase (MIRO) of mitochondrion fission &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000455.8 MIRO1, emb2473 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ehy_g15698 MIRO1, emb2473 regulatory GTPase (MIRO) of mitochondrion fission &... 0.02 OrthoFinder output from all 47 species
GSVIVT01000044001 MIRO1, emb2473 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_23043 MIRO1, emb2473 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os03g59590.1 MIRO1, emb2473,... Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_97016g0010 MIRO1, emb2473 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g22030.1 MIRO1, emb2473 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Smo173355 MIRO1, emb2473 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
Solyc01g098920.4.1 MIRO1, emb2473,... Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e011800_P001 MIRO1, emb2473,... Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR013567 EF_hand_assoc_2 228 314
IPR001806 Small_GTPase 14 174
IPR013566 EF_hand_assoc_1 350 417
No external refs found!