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  5. Zm00001d048655

Zm00001d048655 (GRMZM2G057450)


Aliases : GRMZM2G057450

Description : 27.1.1 RNA.processing.splicing U2 snRNP auxilliary factor, large subunit, splicing factor


Gene families : OG_01_0000900 (Gene family) Phylogenetic Tree(s): OG0000900_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d048655
Cluster HCCA cluster: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000383.37 No alias 27.1.1 RNA.processing.splicing U2 snRNP auxilliary... 0.02 Gene family
Cpa|evm.model.tig00021464.4 No alias No description available 0.02 Gene family
Cre09.g391949 No alias 27.1.1 RNA.processing.splicing U2 snRNP auxilliary... 0.03 Gene family
GSVIVT01018993001 No alias 27.1.1 RNA.processing.splicing U2 snRNP auxilliary... 0.02 Gene family
Solyc02g062920.3.1 Solyc02g062920.3 27.1.1 RNA.processing.splicing ATU2AF65A 0.03 Gene family
Solyc12g008750.2.1 Solyc12g008750.2 27.1.1 RNA.processing.splicing U2 snRNP auxilliary... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 184 253
No external refs found!