Dcu_g05841 (ABCB19, ATABCB19,...)

Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g05841

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00055p00102180	ABCB14,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT4G25960	PGP2	P-glycoprotein 2	0.03	OrthoFinder output from all 47 species
Ala_g07132	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g25151	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g27372	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g29011	PGP10	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g09585	PGP10	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g11005	PGP11	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g14003	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.06G076400.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.35G032800.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g22982	PGP11	subfamily ABCB transporter & original description: none	0.08	OrthoFinder output from all 47 species
Dcu_g41879	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01021365001	PGP9	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Gb_10211	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Gb_10216	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_36497	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os01g50100.1	PGP11, LOC_Os01g50100	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Len_g23455	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
MA_3437g0010	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_636449g0010	No alias	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
MA_82945g0030	PGP17	ABC transporter B family member 17 OS=Arabidopsis...	0.08	OrthoFinder output from all 47 species
MA_9253g0010	No alias	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
Nbi_g24809	PGP2	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g29224	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g43029	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g04029	PGP11	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291	PGP2	subfamily ABCB transporter & original description: CDS=1-4248	0.03	OrthoFinder output from all 47 species
Smo148837	ABCB19,...	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
Solyc09g008240.3.1	PGP1, ABCB1,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Spa_g56665	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e019933_P001	Zm00001e019933	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Zm00001e020070_P001	ATPGP4, PGP4,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	442	590
IPR011527	ABC1_TM_dom	99	371
IPR011527	ABC1_TM_dom	751	1023
IPR003439	ABC_transporter-like_ATP-bd	1091	1239

External Links

No external refs found!

Dcu_g05841 (ABCB19, ATABCB19,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation