Dcu_g05677


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g05677

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00243230 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Adi_g002304 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g114947 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g116582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24367 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g02978 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Als_g03141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03485 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g03803 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03870 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04459 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04940 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g05088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05247 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05716 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06792 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06803 OTP86 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Als_g06902 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g06928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07135 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09957 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10468 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g16091 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16416 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18037 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18401 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18909 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19013 OTP86 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g19077 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g19182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19247 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22752 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g24106 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g26204 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26507 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g26570 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26629 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g28029 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30417 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30496 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30687 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30697 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g30704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30730 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30736 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30819 VAC1, ECB2, ATECB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31230 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g31288 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g32399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38981 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47378 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g54958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54966 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55143 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g55233 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g55271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55801 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g58106 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g58397 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g61852 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g40045 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67869 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g69999 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene03740.t1 Aspi01Gene03740 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31476.t1 Aspi01Gene31476 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44451.t1 CRR2, Aspi01Gene44451 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05305 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g05882 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06220 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g06593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07168 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g07323 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11319 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13544 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g19916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g21419 EMB2744 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g26306 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g29653 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g29882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34331 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g35072 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g35141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37951 EMB2758 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g45094 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67304 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g67667 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g74880 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g78717 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g18955 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07656 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g07713 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08304 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g08443 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08459 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08493 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08536 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08595 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08727 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08773 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08886 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11166 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g16645 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g17201 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17220 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g17915 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g18210 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g18549 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g19445 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g21323 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g22981 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26473 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g26715 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g36357 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g36987 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38644 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g38659 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g40971 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43190 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g43222 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g43242 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g43978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g44186 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g44864 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g45938 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46370 MEF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46754 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g49324 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g50102 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g50153 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g25586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18599 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g53944 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07116 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33833 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g33982 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34234 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34455 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g02088 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g07306 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g26038 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40875 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05592 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g14886 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g005460.1.1 OTP82, Solyc04g005460 Pentatricopeptide repeat-containing protein At2g20540... 0.06 OrthoFinder output from all 47 species
Spa_g18196 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 575 622
IPR002885 Pentatricopeptide_repeat 473 520
IPR002885 Pentatricopeptide_repeat 273 320
IPR002885 Pentatricopeptide_repeat 70 116
IPR002885 Pentatricopeptide_repeat 372 420
IPR002885 Pentatricopeptide_repeat 549 573
IPR002885 Pentatricopeptide_repeat 648 673
IPR002885 Pentatricopeptide_repeat 246 268
IPR002885 Pentatricopeptide_repeat 173 198
IPR002885 Pentatricopeptide_repeat 145 171
No external refs found!