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  5. Dcu_g05540

Dcu_g05540


Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g05540

Target Alias Description ECC score Gene Family Method Actions
AT3G13430 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G19950 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003792 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g008105 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g017488 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g020451 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g021049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066616 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Adi_g083432 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Adi_g085324 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g088761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102739 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ala_g14792 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26879 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Als_g05596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12129 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aob_g27273 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene04099.t1 Aspi01Gene04099 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene11235.t1 Aspi01Gene11235 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene15225.t1 Aspi01Gene15225 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16608.t1 RHC1A, Aspi01Gene16608 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene18424.t1 Aspi01Gene18424 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene49224.t1 Aspi01Gene49224 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene63212.t1 Aspi01Gene63212 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Azfi_s0125.g048560 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Azfi_s0132.g049293 No alias not classified & original description: CDS=1-1575 0.02 OrthoFinder output from all 47 species
Cba_g03836 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Cba_g05184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24805 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.35G016600.1 Ceric.35G016600 not classified & original description: pacid=50582007... 0.01 OrthoFinder output from all 47 species
Dac_g03287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04251 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g13479 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g13726 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g04690 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g07514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09499 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g05277 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g08219 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g01127 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g30061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008897001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
LOC_Os03g59760.1 ATCRT1, LOC_Os03g59760 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os06g42700.1 LOC_Os06g42700 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g11022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g48692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10238 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g10572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19818 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g26016 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g40832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_9328282g0010 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g17850.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species
Msp_g10633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14693 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g25463 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g25662 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g02165 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g04840 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g03871 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ore_g10220 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g20136 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g20916 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g23014 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g34931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27550 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Pir_g43877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61153 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g08615 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Pnu_g11867 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pnu_g12284 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pnu_g13986 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g00999 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000146 No alias not classified & original description: CDS=228-1322 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015372 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sam_g19690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24681 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Smo18753 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Spa_g05878 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g05490 No alias RING-H2-class BTL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g08304 No alias RING-H2-class BTL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g12871 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g14563 No alias RING-H2-class BTL-subclass E3 ubiquiTin ligase &... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 8 40
IPR001841 Znf_RING 224 266
No external refs found!