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  5. Dcu_g05516

Dcu_g05516


Description : not classified & original description: none


Gene families : OG0001257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g05516
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Aev_g13206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G077300.1 Ceric.11G077300 not classified & original description: pacid=50596018... 0.05 OrthoFinder output from all 47 species
Ceric.21G044300.1 Ceric.21G044300 not classified & original description: pacid=50604062... 0.04 OrthoFinder output from all 47 species
Ehy_g13384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g01650.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g36897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR024771 SUZ 178 230
IPR001374 R3H_dom 87 137
No external refs found!