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  5. Dcu_g05493

Dcu_g05493 (OTP82)


Aliases : OTP82

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g05493

Target Alias Description ECC score Gene Family Method Actions
Ala_g24034 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36533 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04417 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33219 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g62612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g68082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02341.t1 Aspi01Gene02341 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22114 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g24030 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45873 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17797 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018607 OTP84 not classified & original description: CDS=1-1542 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021792 EMB2758 not classified & original description: CDS=1-2004 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0175.g024545 No alias not classified & original description: CDS=305-3223 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024723 No alias not classified & original description: CDS=1-3261 0.04 OrthoFinder output from all 47 species
Sam_g29372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 153 200
IPR002885 Pentatricopeptide_repeat 356 403
IPR002885 Pentatricopeptide_repeat 254 303
IPR002885 Pentatricopeptide_repeat 229 252
IPR002885 Pentatricopeptide_repeat 430 452
IPR002885 Pentatricopeptide_repeat 330 352
No external refs found!