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  5. Dcu_g05343

Dcu_g05343


Description : mTERF-type transcription factor & original description: none


Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g05343

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00236880 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.05 OrthoFinder output from all 47 species
AMTR_s02857p00005060 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
AT1G62085 No alias Mitochondrial transcription termination factor family protein 0.03 OrthoFinder output from all 47 species
AT1G62150 No alias Mitochondrial transcription termination factor family protein 0.04 OrthoFinder output from all 47 species
Aev_g02436 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g28698 No alias mTERF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g49279 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26943 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g34183 No alias mTERF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28360 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g12846 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14738 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.20G017100.1 Ceric.20G017100 mTERF-type transcription factor & original description:... 0.09 OrthoFinder output from all 47 species
Dcu_g09151 No alias mTERF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g22736 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.07 OrthoFinder output from all 47 species
GSVIVT01028380001 No alias RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
Gb_15878 No alias transcription factor (mTERF) 0.05 OrthoFinder output from all 47 species
LOC_Os11g14130.1 LOC_Os11g14130 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Len_g24851 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_14049g0010 No alias transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
MA_192398g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_493420g0010 No alias transcription factor (mTERF) 0.06 OrthoFinder output from all 47 species
MA_86824g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_92135g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Msp_g15719 No alias mTERF-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g17760 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g00521 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24410 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24968 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g067960.3.1 Solyc02g067960 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Solyc04g051880.3.1 Solyc04g051880 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
Solyc04g072500.1.1 Solyc04g072500 transcription factor (mTERF) 0.06 OrthoFinder output from all 47 species
Solyc04g072540.3.1 Solyc04g072540 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Spa_g17479 No alias mTERF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30296 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010589_P001 Zm00001e010589 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Zm00001e015855_P001 Zm00001e015855 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Zm00001e022322_P001 Zm00001e022322 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003690 MTERF 175 381
IPR003690 MTERF 100 223
No external refs found!