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  5. Dcu_g05180

Dcu_g05180


Description : deubiquitinase & original description: none


Gene families : OG0000778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g05180
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
Gb_27627 No alias peptidase (PPPDE) 0.03 OrthoFinder output from all 47 species
Len_g17253 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431115g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038787_P002 Zm00001e038787 peptidase (PPPDE) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 16 149
No external refs found!