Aliases : HST, HST1
Description : nucleocytoplasmic transport karyopherin *(XPO5) & original description: none
Gene families : OG0003900 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003900_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00148220 | HST, HST1,... | Protein translocation.nucleus.nucleocytoplasmic... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g105485 | HST, HST1 | nucleocytoplasmic transport karyopherin *(XPO5) &... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene30818.t2 | HST, HST1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.1Z160000.1 | HST, HST1, Ceric.1Z160000 | nucleocytoplasmic transport karyopherin *(XPO5) &... | 0.08 | OrthoFinder output from all 47 species | |
Ceric.24G056400.1 | HST, HST1,... | not classified & original description: pacid=50628658... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g18422 | HST, HST1 | nucleocytoplasmic transport karyopherin *(XPO5) &... | 0.03 | OrthoFinder output from all 47 species | |
MA_10429173g0010 | HST, HST1 | Protein HASTY 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
MA_10436866g0010 | HST, HST1 | Protein HASTY 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
MA_39570g0010 | HST, HST1 | Protein HASTY 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g29681 | No alias | nucleocytoplasmic transport karyopherin *(XPO5) &... | 0.05 | OrthoFinder output from all 47 species | |
Solyc01g098170.3.1 | HST, HST1, Solyc01g098170 | miRNA nuclear export factor (HASTY). XPO5... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g25543 | HST, HST1 | nucleocytoplasmic transport karyopherin *(XPO5) &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026304_P001 | HST, HST1, Zm00001e026304 | miRNA nuclear export factor (HASTY). XPO5... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
CC | GO:0032040 | small-subunit processome | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |