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  5. Dcu_g04510

Dcu_g04510 (P40, AP40, RPSAA, RP40)


Aliases : P40, AP40, RPSAA, RP40

Description : component *(uS2) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0002043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g04510
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cre10.g432800 P40, AP40, RPSAA, RP40 Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Mp2g26290.1 P40, AP40, RPSAA, RP40 component RPSa of SSU proteome 0.01 OrthoFinder output from all 47 species
Msp_g20402 P40, AP40, RPSAA, RP40 component *(uS2) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ore_g18180 P40, AP40, RPSAA, RP40 component *(uS2) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g06946 P40, AP40, RPSAA, RP40 component *(uS2) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pnu_g03003 P40, AP40, RPSAA, RP40 component *(uS2) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pnu_g32276 P40, AP40, RPSAA, RP40 component *(uS2) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c14_15700V3.1 P40, AP40,... 40s ribosomal protein SA B 0.03 OrthoFinder output from all 47 species
Pp3c14_17310V3.1 P40, AP40,... 40s ribosomal protein SA B 0.03 OrthoFinder output from all 47 species
Pp3c17_17600V3.1 P40, AP40,... 40s ribosomal protein SA 0.02 OrthoFinder output from all 47 species
Zm00001e010780_P001 P40, AP40,... component RPSa of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e038933_P001 P40, AP40,... component RPSa of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 13 106
IPR001865 Ribosomal_S2 113 177
No external refs found!