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  5. Dcu_g04161

Dcu_g04161


Description : not classified & original description: none


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g04161

Target Alias Description ECC score Gene Family Method Actions
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.02 OrthoFinder output from all 47 species
Ceric.09G071400.1 Ceric.09G071400 not classified & original description: pacid=50587640... 0.11 OrthoFinder output from all 47 species
GSVIVT01013270001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01017643001 No alias No description available 0.04 OrthoFinder output from all 47 species
MA_10428265g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10432463g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_119498g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_58863g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g009370.4.1 Solyc09g009370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g17786 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009291 Vps62 2282 2429
IPR009291 Vps62 2054 2187
IPR009291 Vps62 4308 4429
IPR010482 Peroxin 2946 3082
IPR031646 VPS13_extend_chorein 136 382
IPR031642 VPS13_mid_RBG 567 793
IPR009543 VPS13_VAB 3407 3605
IPR026854 VPS13-like_N 2 117
No external refs found!