Dcu_g04116 (HY3, OOP1, PHYB)

Aliases : HY3, OOP1, PHYB

Description : temperature sensor protein *(PHY-B) & original description: none

Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g04116

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00153850	FHY2, HY8, PHYA,...	External stimuli response.light.red/far red light.PHY...	0.02	OrthoFinder output from all 47 species
GSVIVT01021381001	PHYE	External stimuli response.temperature.temperature...	0.03	OrthoFinder output from all 47 species
Sam_g09219	No alias	phytochrome photoreceptor *(PHY) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g11691	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Smo161430	HY3, OOP1, PHYB	External stimuli response.temperature.temperature...	0.03	OrthoFinder output from all 47 species
Spa_g14459	FHY2, HY8, PHYA, FRE1	phytochrome photoreceptor *(PHY) & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e012154_P002	FHY2, HY8, PHYA,...	phytochrome photoreceptor (PHY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013515	Phytochrome_cen-reg	407	581
IPR013767	PAS_fold	743	865
IPR013767	PAS_fold	612	727
IPR003594	HATPase_C	994	1105
IPR003018	GAF	215	394
IPR013654	PAS_2	66	181

External Links

No external refs found!