Dcu_g04101


Description : not classified & original description: none


Gene families : OG0001784 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001784_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g04101

Target Alias Description ECC score Gene Family Method Actions
AT3G51640 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT3G51650 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
Als_g14343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G072300.1 Ceric.15G072300 not classified & original description: pacid=50640356... 0.04 OrthoFinder output from all 47 species
Ehy_g13830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030211001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os11g02190.1 LOC_Os11g02190 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g02130.1 LOC_Os12g02130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g03397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002518 No alias not classified & original description: CDS=332-3076 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005829 No alias not classified & original description: CDS=193-3195 0.02 OrthoFinder output from all 47 species
Sam_g14256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g28437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g018310.4.1 Solyc09g018310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g14332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 877 925
No external refs found!