1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g04022

Dcu_g04022 (TIC40, ATTIC40, PDE120)


Aliases : TIC40, ATTIC40, PDE120

Description : component *(Tic40) of inner envelope TIC translocation system & original description: none


Gene families : OG0004334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004334_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g04022

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00175860 TIC40, ATTIC40,... Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
Aop_g04288 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
GSVIVT01025999001 TIC40, ATTIC40, PDE120 Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
LOC_Os04g35900.1 TIC40, ATTIC40,... component Tic40 of inner envelope TIC translocation system 0.04 OrthoFinder output from all 47 species
Pnu_g13431 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Zm00001e008048_P001 TIC40, ATTIC40,... component Tic40 of inner envelope TIC translocation system 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041243 STI1/HOP_DP 400 450
No external refs found!