Dcu_g03444

Description : adaptor component *(ClpS) of chloroplast Clp-type protease complex & original description: none

Gene families : OG0005952 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005952_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g03444
Cluster	HCCA: Cluster_25

Target	Alias	Description	ECC score	Gene Family Method
AT1G68660	No alias	Ribosomal protein L12/ ATP-dependent Clp protease...	0.04	OrthoFinder output from all 47 species
Als_g00481	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.05	OrthoFinder output from all 47 species
Aob_g02628	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Aop_g02009	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Azfi_s0060.g034789	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Ceric.39G010100.1	Ceric.39G010100	adaptor component *(ClpS) of chloroplast Clp-type...	0.08	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000241.124	No alias	Protein degradation.peptidase families.serine-type...	0.01	OrthoFinder output from all 47 species
Ehy_g03330	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
Ehy_g11848	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
GSVIVT01008253001	No alias	Protein degradation.peptidase families.serine-type...	0.05	OrthoFinder output from all 47 species
LOC_Os08g33540.1	LOC_Os08g33540	adaptor component ClpS of chloroplast Clp-type protease complex	0.06	OrthoFinder output from all 47 species
Lfl_g00995	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Nbi_g00525	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.05	OrthoFinder output from all 47 species
Pir_g00333	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Solyc03g119700.3.1	Solyc03g119700	adaptor component ClpS of chloroplast Clp-type protease complex	0.04	OrthoFinder output from all 47 species
Spa_g51699	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Tin_g00248	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Zm00001e004147_P001	Zm00001e004147	adaptor component ClpS of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0030163	protein catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0004359	glutaminase activity	IEP	HCCA
BP	GO:0006081	cellular aldehyde metabolic process	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016730	oxidoreductase activity, acting on iron-sulfur proteins as donors	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042816	vitamin B6 metabolic process	IEP	HCCA
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	HCCA
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	HCCA
BP	GO:0042823	pyridoxal phosphate biosynthetic process	IEP	HCCA
BP	GO:0046184	aldehyde biosynthetic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003769	ClpS_core	91	157

External Links

No external refs found!

Dcu_g03444

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation