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  5. Dcu_g03190

Dcu_g03190


Description : regulatory GTPase (EFL1) of LSU processome & original description: none


Gene families : OG0004363 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004363_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g03190
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00150000 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Ala_g12681 No alias regulatory GTPase (EFL1) of LSU processome & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 23 373
IPR000640 EFG_V-like 946 1030
IPR004161 EFTu-like_2 468 547
IPR041095 EFG_II 563 627
No external refs found!