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Aliases : CHB3, ATSWI3D
Description : SMARCC component *(SWI3) of chromatin remodeling complex & original description: none
Gene families : OG0000817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000817_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00059p00072490 | CHB3, ATSWI3D,... | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G21700 | CHB4, SWI3C, ATSWI3C | SWITCH/sucrose nonfermenting 3C | 0.03 | OrthoFinder output from all 47 species | |
| AT4G34430 | CHB3, ATSWI3D | DNA-binding family protein | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g02056 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G090000.1 | CHB4, SWI3C,... | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G074300.1 | CHB3, ATSWI3D,... | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16559 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008831001 | CHB4, SWI3C, ATSWI3C | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01013428001 | CHB2, SWI3B, ATSWI3B | Chromatin organisation.chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01031951001 | CHB3, ATSWI3D | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g01970.1 | CHB3, ATSWI3D,... | component BAF255/170 of chromatin remodeling complex | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g08080.1 | CHB4, SWI3C,... | component BAF255/170 of chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g07560 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g14234 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g15610.1 | SWI3A, CHB1, ATSWI3A | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g26887 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g10605 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g28434 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36620 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g47159 | CHB2, SWI3B, ATSWI3B | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006350 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g097450.4.1 | SWI3A, CHB1,... | component BAF255/170 of chromatin remodeling complex | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g082760.3.1 | CHB2, SWI3B,... | component BAF255/170 of chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007799_P001 | SWI3A, CHB1,... | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e024548_P001 | CHB4, SWI3C,... | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| No external refs found! |