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  5. Dcu_g03095

Dcu_g03095 (LRS1)


Aliases : LRS1

Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0002511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g03095

Target Alias Description ECC score Gene Family Method Actions
Adi_g059134 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Adi_g087408 LRS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098959 LRS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58023 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dac_g09416 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g07063 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
MA_18695g0010 LRS1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g09811 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Smo139346 LRS1 Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species
Solyc01g098090.3.1 LRS1, Solyc01g098090 Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
Zm00001e018453_P003 LRS1, Zm00001e018453 Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
Zm00001e039445_P001 LRS1, Zm00001e039445 Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR021772 WDR48/Bun107 621 765
IPR001680 WD40_repeat 256 290
IPR001680 WD40_repeat 217 248
IPR001680 WD40_repeat 295 330
No external refs found!