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  5. Dcu_g03052

Dcu_g03052 (TRFL5)


Aliases : TRFL5

Description : telomeric dsDNA-binding protein & original description: none


Gene families : OG0003619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g03052

Target Alias Description ECC score Gene Family Method Actions
AT1G15720 TRFL5 TRF-like 5 0.02 OrthoFinder output from all 47 species
Adi_g081475 ATTRB3, TBP2, TRB3 telomeric dsDNA-binding protein & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04662 TRFL5 telomeric dsDNA-binding protein & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01024564001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Lfl_g04142 TRFL5 telomeric dsDNA-binding protein & original description: none 0.05 OrthoFinder output from all 47 species
Mp3g00360.1 No alias transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Ore_g31243 No alias telomeric dsDNA-binding protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37085 No alias telomeric dsDNA-binding protein & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e030143_P001 TRFL8, Zm00001e030143 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 647 695
No external refs found!