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  5. Dcu_g02827

Dcu_g02827 (ATSRL1)


Aliases : ATSRL1

Description : not classified & original description: none


Gene families : OG0003543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g02827

Target Alias Description ECC score Gene Family Method Actions
AT5G37370 ATSRL1 PRP38 family protein 0.03 OrthoFinder output from all 47 species
Als_g27184 ATSRL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G036200.1 ATSRL1, Ceric.07G036200 not classified & original description: pacid=50627179... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021312.50 ATSRL1 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Zm00001e031175_P003 ATSRL1, Zm00001e031175 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005037 PRP38 12 163
No external refs found!