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  4. Sequence
  5. Dcu_g02725

Dcu_g02725


Description : STIG1/GRI precursor polypeptide & original description: none


Gene families : OG0005894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g02725
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00210870 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.02 OrthoFinder output from all 47 species
AMTR_s00068p00165220 GRI,... Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
AT1G50650 No alias Stigma-specific Stig1 family protein 0.03 OrthoFinder output from all 47 species
AT1G50720 No alias Stigma-specific Stig1 family protein 0.03 OrthoFinder output from all 47 species
AT1G53130 GRI Stigma-specific Stig1 family protein 0.05 OrthoFinder output from all 47 species
AT5G55110 No alias Stigma-specific Stig1 family protein 0.04 OrthoFinder output from all 47 species
Gb_39518 No alias STIG1/GRI precursor polypeptide 0.03 OrthoFinder output from all 47 species
Len_g20535 No alias STIG1/GRI precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
MA_29024g0010 No alias STIG1/GRI precursor polypeptide 0.03 OrthoFinder output from all 47 species
MA_815326g0010 No alias STIG1/GRI precursor polypeptide 0.05 OrthoFinder output from all 47 species
Mp1g29600.1 No alias STIG1/GRI precursor polypeptide 0.03 OrthoFinder output from all 47 species
Mp5g16620.1 No alias STIG1/GRI precursor polypeptide 0.04 OrthoFinder output from all 47 species
Mp5g16630.1 No alias STIG1/GRI precursor polypeptide 0.04 OrthoFinder output from all 47 species
Mp5g16640.1 No alias STIG1/GRI precursor polypeptide 0.02 OrthoFinder output from all 47 species
Mp5g16650.1 No alias STIG1/GRI precursor polypeptide 0.04 OrthoFinder output from all 47 species
Solyc02g036240.1.1 Solyc02g036240 STIG1/GRI precursor polypeptide 0.02 OrthoFinder output from all 47 species
Solyc02g080920.3.1 Solyc02g080920 STIG1/GRI precursor polypeptide 0.02 OrthoFinder output from all 47 species
Solyc05g050730.1.1 Solyc05g050730 STIG1/GRI precursor polypeptide 0.04 OrthoFinder output from all 47 species
Solyc06g073220.1.1 Solyc06g073220 STIG1/GRI precursor polypeptide 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR006969 Stig1 116 208
No external refs found!