Dcu_g02657

Description : regulatory protein *(SCAMP) of exocytic trafficking & original description: none

Gene families : OG0001155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001155_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g02657
Cluster	HCCA: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
AT1G11180	No alias	Secretory carrier membrane protein (SCAMP) family protein	0.02	OrthoFinder output from all 47 species
AT1G32050	No alias	SCAMP family protein	0.04	OrthoFinder output from all 47 species
Ala_g01553	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.03	OrthoFinder output from all 47 species
Als_g08101	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.03	OrthoFinder output from all 47 species
Aob_g01403	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.02	OrthoFinder output from all 47 species
Cre02.g089900	No alias	Secretory carrier-associated membrane protein 5 OS=Oryza...	0.02	OrthoFinder output from all 47 species
GSVIVT01030566001	No alias	Secretory carrier-associated membrane protein 1...	0.05	OrthoFinder output from all 47 species
LOC_Os01g57220.1	LOC_Os01g57220	Secretory carrier-associated membrane protein 2 OS=Oryza...	0.04	OrthoFinder output from all 47 species
LOC_Os02g47010.1	LOC_Os02g47010	Secretory carrier-associated membrane protein 5 OS=Oryza...	0.04	OrthoFinder output from all 47 species
LOC_Os03g38590.1	LOC_Os03g38590	Secretory carrier-associated membrane protein 4 OS=Oryza...	0.03	OrthoFinder output from all 47 species
LOC_Os05g42330.1	LOC_Os05g42330	Secretory carrier-associated membrane protein 3 OS=Oryza...	0.03	OrthoFinder output from all 47 species
LOC_Os08g06440.1	LOC_Os08g06440	Secretory carrier-associated membrane protein 6 OS=Oryza...	0.04	OrthoFinder output from all 47 species
Nbi_g05251	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.03	OrthoFinder output from all 47 species
Pir_g00864	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.03	OrthoFinder output from all 47 species
Pir_g12817	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.03	OrthoFinder output from all 47 species
Smo141352	No alias	Secretory carrier-associated membrane protein 1 OS=Oryza...	0.03	OrthoFinder output from all 47 species
Solyc07g054490.3.1	Solyc07g054490	Secretory carrier-associated membrane protein 3...	0.02	OrthoFinder output from all 47 species
Solyc10g008550.3.1	Solyc10g008550	Secretory carrier-associated membrane protein 2 OS=Oryza...	0.03	OrthoFinder output from all 47 species
Solyc12g010750.2.1	Solyc12g010750	Secretory carrier-associated membrane protein 1 OS=Oryza...	0.03	OrthoFinder output from all 47 species
Spa_g04692	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.03	OrthoFinder output from all 47 species
Spa_g53807	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.03	OrthoFinder output from all 47 species
Zm00001e004899_P001	SC3, Zm00001e004899	Secretory carrier-associated membrane protein 4 OS=Oryza...	0.03	OrthoFinder output from all 47 species
Zm00001e015529_P002	Zm00001e015529	Secretory carrier-associated membrane protein 6 OS=Oryza...	0.05	OrthoFinder output from all 47 species
Zm00001e032063_P002	Zm00001e032063	Secretory carrier-associated membrane protein 3 OS=Oryza...	0.05	OrthoFinder output from all 47 species
Zm00001e041560_P001	Zm00001e041560	Secretory carrier-associated membrane protein 6 OS=Oryza...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0004615	phosphomannomutase activity	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	HCCA
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	HCCA
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	HCCA
BP	GO:0009298	GDP-mannose biosynthetic process	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016603	glutaminyl-peptide cyclotransferase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016755	aminoacyltransferase activity	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
BP	GO:0017186	peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018199	peptidyl-glutamine modification	IEP	HCCA
BP	GO:0019673	GDP-mannose metabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0030832	regulation of actin filament length	IEP	HCCA
BP	GO:0030833	regulation of actin filament polymerization	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
BP	GO:0032271	regulation of protein polymerization	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	HCCA
BP	GO:0032970	regulation of actin filament-based process	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051493	regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
BP	GO:0110053	regulation of actin filament organization	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007273	SCAMP	113	284

External Links

No external refs found!

Dcu_g02657

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation