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  5. Dcu_g02600

Dcu_g02600 (PBG1)


Aliases : PBG1

Description : beta-type-7 component *(PBG) of 26S proteasome & original description: none


Gene families : OG0004102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g02600

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00154550 PBG1,... Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
AT1G56450 PBG1 20S proteasome beta subunit G1 0.08 OrthoFinder output from all 47 species
Adi_g007501 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g04985 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ceric.08G036200.1 PBG1, Ceric.08G036200 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000808.43 PBG1 Protein degradation.26S proteasome.20S core... 0.05 OrthoFinder output from all 47 species
Cre06.g280850 PBG1 Protein degradation.26S proteasome.20S core... 0.07 OrthoFinder output from all 47 species
Dac_g00589 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Dde_g21621 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ehy_g26230 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Gb_09437 PBG1 component beta type-7 of 26S proteasome 0.04 OrthoFinder output from all 47 species
MA_10427481g0010 PBG1 component beta type-7 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Nbi_g04663 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pir_g00404 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pp3c18_13650V3.1 PBG1, Pp3c18_13650 20S proteasome beta subunit G1 0.02 OrthoFinder output from all 47 species
Smo271646 PBG1 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Solyc11g069150.3.1 PBG1, Solyc11g069150 component beta type-7 of 26S proteasome 0.09 OrthoFinder output from all 47 species
Spa_g08872 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Spa_g16372 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Spa_g29943 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Tin_g06402 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Zm00001e034696_P001 PBG1, Zm00001e034696 component beta type-7 of 26S proteasome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 53 235
No external refs found!