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  5. Dcu_g02582

Dcu_g02582


Description : component *(Bud13) of non-snRNP MOS4-associated complex & original description: none


Gene families : OG0007393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g02582

Target Alias Description ECC score Gene Family Method Actions
AT3G47120 No alias RNA recognition motif (RRM)-containing protein 0.03 OrthoFinder output from all 47 species
Aev_g03020 No alias component *(Bud13) of non-snRNP MOS4-associated complex... 0.03 OrthoFinder output from all 47 species
Aop_g18121 No alias component *(Bud13) of non-snRNP MOS4-associated complex... 0.06 OrthoFinder output from all 47 species
Ceric.22G011300.1 Ceric.22G011300 component *(Bud13) of non-snRNP MOS4-associated complex... 0.08 OrthoFinder output from all 47 species
Cre06.g280550 No alias Zinc finger CCCH domain-containing protein 42... 0.02 OrthoFinder output from all 47 species
Pir_g16457 No alias component *(Bud13) of non-snRNP MOS4-associated complex... 0.03 OrthoFinder output from all 47 species
Spa_g06670 No alias component *(Bud13) of non-snRNP MOS4-associated complex... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 132 155
IPR000504 RRM_dom 38 107
No external refs found!