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  5. Dcu_g02534

Dcu_g02534


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g02534
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Ala_g10974 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18515 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03403.t1 Aspi01Gene03403 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04314 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22715 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 55 100
IPR022143 DUF3675 107 218
No external refs found!